Home

Software

miRNAkey – A software pipeline for the analysis of microRNA Deep Sequencing data

Christoph | September 13, 2010 |

Deep Sequencing technologies (Next Generation Sequencing) are increasingly used to obtain a more accurate depiction of miRNA expression profiles in living cells. This type of analysis is a key step towards improving our understanding of the complexity and mode of miRNA regulation. miRNAkey is a software package designed by Researchers at Tel Aviv University and to be used as a base-station for the analysis of miRNA deep sequencing data. This package implements common steps taken in the analysis of such data, as well as adds unique features, such as data statistics and multiple mapping levels, generating a novel platform for the analysis of miRNA expression. Through the use of a simple graphical interface, the user can determine the analysis steps. The tabular and graphical output contains detailed reports on the sequence reads and provides an accurate picture of the differentially expressed miRNAs in paired samples.

Download: http://ibis.tau.ac.il/miRNAkey/

1: Ronen R, Gan I, Modai S, Sukacheov A, Dror G, Halperin E, Shomron N. miRNAkey:
a software for microRNA Deep Sequencing analysis. Bioinformatics. 2010 Aug 27.
[Epub ahead of print] PubMed PMID: 20801911.
http://www.ncbi.nlm.nih.gov/pubmed/20801911

Related Posts

UEA sRNA workbench

Software

April 8, 2017 | Christoph | No Comments |

More

miRvar Database for Genomic Variations in microRNAs logo

Software, Web Based Tools

October 19, 2011 | Christoph | No Comments |

More

Java based sRNA workbench for analysing small RNA data from Next Generation Sequencing devices

Software

March 8, 2012 | Christoph | No Comments |

More

miRWalk-version2-cloud

Software, Web Based Tools

December 2, 2014 | Christoph | No Comments |

More



Related news

Minchev modas de los 70
Que decir cuando alguien te dice que te ama
Nuketown 2025 comment a voir des pouvoirs magiques
Donnybrook caravan park accommodation waterval boven
Marinette wi accommodations unlimited
6 play rubrique connect m6 direct
Livret epargne populaire banque populaire d'alsace
Oleiro o meu vaso se quebrou loja
Grelka skyrim que te secondaire